Algorithmic Analysis of Clinical and Neuropsychological Data in Localization-Related Epilepsy

Algorithmic Analysis of Clinical and Neuropsychological Data in Localization-Related Epilepsy

Masoud Latifi-Navid (Department of Mechanical Engineering, Middle East Technical University, Ankara, Turkey), Kost V. Elisevich (Department of Clinical Neurosciences, Spectrum Health System, Grand Rapids, MI, USA) and Hamid Soltanian-Zadeh (Department of Electrical and Computer Engineering, Control and Intelligent Processing Center of Excellence, University of Tehran, Tehran, Iran & School of Cognitive Sciences, Institute for Research in Fundamental Sciences (IPM), Tehran, Iran & Departments of Research Administration and Radiology, Medical Image Analysis Lab, Henry Ford Health System, Detroit, MI, USA)
DOI: 10.4018/ijcmam.2014010103
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Abstract

The current study examines algorithmic approaches for analysis of nonimaging (i.e., clinical, electrographic and neuropsychological) attributes in localization-related epilepsy (LRE), specifically, their impact on the selection of patients for surgical consideration. Both invasive electrographic and imaging data are excluded here to concentrate upon the initial clinical presentation and the varied elements of the seizure history, ictal semiology, risk and seizure-precipitating factors and physical findings in addition to several features of the neuropsychological profile including various parameters of cognition and both speech and memory lateralization. The data was accrued in a database of temporal lobe epilepsy patients (HBIDS). Six algorithms comprising feature selection, clustering and classification approaches were used. The Correlation-Based Feature Selection (CFS) and the Classifier Subset Evaluator (CSE) with the Genetic Algorithm (GA) search tool and ReliefF Attribute Evaluation approaches provided for feature selection. The Expectation Maximization (EM) Class Clustering and Incremental Conceptual Clustering (COBWEB) provided data clustering and the Multilayer Perceptron (MLP) Classifier was the classification tool at all stages of the study. The Engel Classification was used as an output of classifier for surgical success. Attributes demonstrating the highest correlation with the outcome class and the least intercorrelation with each other, according to CFS, were selected. These were then ranked using ReliefF and the top rankings chosen. The best attribute combination for each cluster was found by MLP. COBWEB provided the best results showing an association of 56% with Engel class. In conclusion, an algorithmic approach to the study of LRE is feasible with current findings supporting the need for correlative electrographic and imaging data and a greater archival population.
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Introduction

In the United States alone, there are approximately 250,000 medically refractory (i.e., interactable) epileptic patients (Elisevich et al., 1996). Previous studies on predictors of postoperative seizure freedom using multivariable analysis differ in both methodology and results, some including invasive tests or image modality data (Armon, Radtke, Friedman, & Dawson, 1996; Berg, Walczak, Hirsch, & Spencer, 1998; Clusmann et al., 2002; Hennessy et al., 2001; Janszky et al., 2005; Janszky et al., 2006; Jeha et al., 2006; Spencer et al., 2005; Tonini et al., 2004; Yun et al., 2006).

Uijl et al. (2008) proposed a model for prognosis after temporal lobe epilepsy surgery using a combination of predictors. The results of this study showed 85% seizure-freedom among patients with a high probability of seizure freedom, and 40% seizure-freedom among patients with a high risk of not becoming seizure-free. In another study, Antel et al. (2002) predicted surgical outcome in temporal lobe epilepsy patients using MRI and MRSI. In the Antel study, 75% of patients predicted accurately to fall in Engel class 1 after surgery on the basis of imaging alone. In the present study, we have developed a new algorithm based solely upon clinical, electrographic and neuropsychological data to predict surgical outcome. The main purpose of the study is to examine standard nonimaging evaluations as means of prognostication without relying on extraoperative electrocorticography (eECoG) or the many different imaging techniques used in these investigations. Clustering of patients in categorical groups and identification of the most effective features for each cluster permits the selection of a suitable classifier for each cluster. In order to identify the best features related to output (i.e., Engel classification), a combination of different feature selections and ranking algorithms are used aside a genetic algorithm search approach. For this purpose, integration of acquired multimodality data is necessary to obtain new effective features that can predict surgical outcome.

Data analysis with advanced computational methods (Siadat, Soltanian-Zadeh, Fotouhi, & Elisevich, 2005) leads to the use of artificial intelligence and machine learning algorithms. Accuracy of machine learning algorithms in an application depends on several factors. One of the challenges is selection of the best subset of available features. To this end, redundant features may be detected and eliminated. This may lead to more accurate, more effective, and faster results. Another challenge is selection of the best clustering approach. Our raw data include 139 instances with 102 attributes. These attributes are composed of video-scalp EEG analysis data based on well-defined standards, outcomes based on Engel classification, base tables (e.g., anti-epileptic drug information, seizure descriptions, medical history), neuropsychology, and Wada tests (Table 3). The large number of attributes may have negative effects on the classification accuracy. Therefore, effective and useful attributes should be found in order to make the classification simpler and more accurate.

In this paper, we introduce six different algorithms for feature selection, clustering and classification. The main differences among these algorithms reflect different feature selection and ranking approaches and clustering methods. The feature selection and attribute ranking algorithms are explained as are the different clustering approaches combined with a multilayer perceptron classifier to predict the outcome of epilepsy surgery based on Engel classification. The outputs of each feature selection algorithm are reported and the list of selected attributes for each cluster are shown in the supplementary tables.

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