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What is Grid Job Submission and Execution

Chapter 12
Handbook of Research on Computational Grid Technologies for Life Sciences, Biomedicine, and Healthcare
Workflows are typically expressed in certain languages and then have to be executed. Often, the entire workflow is called a “job” which needs to be submitted to the Grid and executed on Grid computing resources.
Published in Chapter:
High-Throughput Data Analysis of Proteomic Mass Spectra on the SwissBioGrid
Andreas Quandt (Swiss Institute of Bioinformatics, Switzerland), Sergio Maffioletti (University of Lugano, Switzerland), Cesare Pautasso (Swiss Institute of Bioinformatics, Switzerland), Heinz Stockinger (Swiss Institute of Bioinformatics, Switzerland), and Frederique Lisacek (ETH Zurich, Switzerland)
Copyright: © 2009 |Pages: 17
DOI: 10.4018/978-1-60566-374-6.ch012
Abstract
Proteomics is currently one of the most promising fields in bioinformatics as it provides important insights into the protein function of organisms. Mass spectrometry is one of the techniques to study the proteome, and several software tools exist for this purpose. The authors provide an extendable software platform called swissPIT that combines different existing tools and exploits Grid infrastructures to speed up the data analysis process for the proteomics pipeline.
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