Patient anatomy, biochemical response, as well functional evaluation at organ level, are key fields that produce a significant amount of multi modal information during medical diagnosis. Visualization, processing, and storage of the acquired data sets are essential tasks in everyday medical practice. In order to perform complex processing that involves or rely on image data a robust as well versatile data structure was used as extension of the Visualization Toolkit (VTK). The proposed structure serves as a universal registration container for acquired information and post processed resulted data. The structure is a dynamic multidimensional data holder to host several modalities and/or Meta data like fused image sets, extracted features (volumetric, surfaces, edges) providing a universal coordinate system used for calculations and geometric processes. A case study of Treatment Planning System (TPS) in the stereotactic radiotherapy (RT) based on the proposed structure is discussed as an efficient medical application.
Computer aided medical applications for diagnosis, therapy, simulation or training proliferate gradually in everyday practice heavily relying on image data (Dawson and Kaufmann, 1998; Spitzer & Whitlock, 1998). Radio therapy planning, surgery as well medical simulation requires anatomic and physical modeling of the whole or part of the human body. Further on in silico functional study of the human body physiology requires the interoperation of several models to approximate an as real as possible behavior (Noble, 2002; Gavaghan, Garny, Maini, & Kohl, 2006; Seemann, Hoeper, Doessel, Holden, & Zhang, 2006). Major sources of real world data related to anatomical details are tomographic image sets. Tomographic image sets of 3D solid objects are in general stacked 2D cross-sectional images of the inspected object that contain geometric information mixed with material properties of the solid in terms of radiation absorbance.
The modality used to obtain the tomographic set determines the geometric accuracy of anatomical regions, the resolution of material properties as well functional characteristics. The almost annual doubling in computer power permits today real time manipulation of simultaneous multimodal datasets representation also know as image fusion and 3D image registration. Sometimes modalities act complementary in cases of sparse acquired datasets (Shim, Pitto, Streicher, Hunter P. J. & Anderson I. A. 2007). In order to study physiological function of internal organs several models have been proposed ranging from simple calculation diagrams to complex animated 3D solid models (France et al. 2005; Noble 2002; Seemann, 2007; Selberg & Vanderploeg, 1994; Spirka & Damasa, 2007). Almost all models involve dynamics and geometry. Physiological functions rule dynamics, dynamics produce data and data become finally visualized (Freudenberg, Schiemann, Tiede, & Hoehne, 2000). Soft tissue simulation used extensively in computer assisted surgery planning or training is an example. Tissue is modeled as a deformable object while collision detection between the virtual surgery instruments or even neighbor organs is used. Deformation is modeled according to physiological data while collision detection queries the geometric models to undertake the desired action for example simulated tissue ablation, rapture (Nealen et al. 2005; Teschner et al., 2005).
Key Terms in this Chapter
Image Fusion: Simultaneous presentation of multimodal registered images on a visual media.
Multimodal Imaging (Multispectral): Images of the same object using different physical acquisition technology the term is widely used for medical imaging while multispectral refers to satellite imaging and survey.
Octtrees: 3D space divison data structures analogous to 2D quad trees. Used for storage, compression, collision detection, point search etc.of 3D models.
Surface Reconstruction: The reconstrunction of geometrical surface The surface might by a point cloud, know contours of the recoctructed surface, known gradients.
Visualization Toolkit (VTK): An open source graphical toolkit widely used as a common extendable customizable platform for scientific visualization.
Image Registration: Registration of images in a common known reference coordinate system.
Treatment Planning System (TPS): A computer based system used to simulate, calculate and optimize the radiotherapy treatment of patients. The main tasks are lesion localization, radiation plan generation according to safety and health constaints and geometric feasibility plan optimization.
Contouring: A subdivision process where a set of points logically connected forms a construct that represents a common characteristic feature in general. On a 2D space contouring generates lines while on a 3D space beside lines and surfaces.
Implicit Surface Modeling: Specific modeling process that approximates every geometrical model using implicit mathematical functions as analytical surface representation constructing complex geometric representations maintaining mathematical functionality of the final model.
Stereotactic Radiotherapy: A Radiation therapy procedure that requires precise localization of the target area to deliver fractioned prescribed dose by means of convergent or not beams.
Dose Calculation/Optimization: The procedure to determine the body absorbed energy in both the lesion and healthy tissue. The optimization of the process is inherent due to steep dose delivery around the target.
Complete Chapter List
Themis P. Exarchos, Athanasios Papadopoulos, Dimitrios I. Fotiadis
Ioannis Dimou, Michalis Zervakis, David Lowe, Manolis Tsiknakis
William Hsu, Alex A.T. Bui, Ricky K. Taira, Hooshang Kangarloo
Spyretta Golemati, John Stoitsis, Konstantina S. Nikita
Christos V. Bourantas, Katerina Naka, Dimitrios Fotiadis, Lampros Michalis
Stavroula Mougiakakou, Ioannis Valavanis, Alexandra Nikita, Konstantina S. Nikita
Marotesa Voultsidou, J. Michael Herrmann
Dimitrios C. Karampinos, Robert Dawe, Konstantinos Arfanakis, John G. Georgiadis
Dimitrios G. Tsalikakis, Petros S. Karvelis, Dimitrios I. Fotiadis
Katia Marina Passera, Luca Tommaso Mainardi
Lena Costaridou, Spyros Skiadopoulos, Anna Karahaliou, Nikolaos Arikidis, George Panayiotakis
E. Kyriacou, C.I. Christodoulou, C. Loizou, M.S. Pattichis, C.S. Pattichis, S. Kakkos
Marios Neofytou, Constantinos Pattichis, Vasilios Tanos, Marios Pattichis, Eftyvoulos Kyriacou
Thomas V. Kilindris, Kiki Theodorou
Ioannis Tsougos, George Loudos, Panagiotis Georgoulias, Konstantina S. Nikita, Kiki Theodorou
Evanthia E. Tripoliti, Dimitrios I. Fotiadis, Konstantia Veliou
Anastasios Koutlas, Dimitrios I. Fotiadis
Aristotelis Chatziioannou, Panagiotis Moulos
Nikolaos Giannakeas, Dimitrios I. Fotiadis
Petros S. Karvelis, Dimitrios I. Fotiadis
O. Lezoray, G. Lebrun, C. Meurie, C. Charrier, A. Elmotataz, M. Lecluse
Michael Haefner, Alfred Gangl, Michael Liedlgruber, A. Uhl, Andreas Vecsei, Friedrich Wrba
C. Papaodysseus, P. Rousopoulos, D. Arabadjis, M. Panagopoulos, P. Loumou
Alexia Giannoula, Richard S.C. Cobbold
Valentina Russo, Roberto Setola
George K. Matsopoulos
Alberto Taboada-Crispi, Hichem Sahli, Denis Hernandez-Pacheco, Alexander Falcon-Ruiz
C. Delgorge-Rosenberger, C. Rosenberger
Charalampos Doukas, Ilias Maglogiannis