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What is Data Acquisition

Chapter 45

Handbook of Research on Systems Biology Applications in Medicine

The group of techniques performed in order to achieve a digital image of a tissue sample, suitable for analysis.

Published in Chapter:

Automated Image Analysis Approaches in Histopathology

Ross Foley (University College Dublin (UCD), Ireland)

Source Title: Handbook of Research on Systems Biology Applications in Medicine

DOI: 10.4018/978-1-60566-076-9.ch045

Abstract

The field of histopathology has encountered a key transition point with the progressive move towards use of digital slides and automated image analysis approaches. This chapter discusses the various methods and techniques involved in the automation of image analysis in histopathology. Important concepts and techniques are explained in the 5 main areas of workflow within image analysis in histopathology: data acquisition, the digital image, image pre-processing, segmentation, and machine learning. Furthermore, examples of the application of these concepts and techniques in histopathological research are then given.